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A cycle connecting science and society

Discover develop optimize & scale cycle

A reinforcing cycle where discovery, development, optimization, and scaling convert knowledge into capacity and new societal value.

Discovery → Development → Optimization and scaling → New capacity

Yizhou Ma · Wageningen University

01 · The DDOs cycle

A reinforcing cycle of knowledge and capacity

Scientific discovery provides fundamental principles, while engineering and optimization translate those principles into capabilities that function under practical conditions.

The cycle becomes reinforcing when engineered capabilities support new experiments, which reveal principles that guide subsequent development and optimization.

Discovery, development, optimization, and scaling cycle connecting knowledge, capacity, and value.
Diagram 1 · The discovery, development, optimization, and scaling cycle

01

Discover

Fundamental principles explain how a system behaves and identify mechanisms that could support new functions. This is science.

02

Develop

Engineering converts scientific theories and understanding into instruments, processes, models, or materials that operate and interact.

03

Optimize and scale

Optimization improves efficiency, while scaling makes volume effects visible across conditions, sources, and application contexts.

04

Enable

The resulting capacity supports new science, while optimized and scaled development creates routes toward industrial, economic, and broader societal value.

02 · A microbial cell factory

One cycle, viewed through microbial biomanufacturing

A microbial cell factory illustrates how molecular understanding can progress through strain engineering and bioprocess optimization toward scalable manufacturing.

Microbial biomanufacturing emerges through repeated exchanges between biological discovery, strain development, fermentation optimization, and the biosynthesis capabilities produced.

Microbial cell factory example connecting regulation, strain, process, and molecule through repeated development cycles.
Diagram 2 · The cycle illustrated through a microbial cell factory

For science

Knowledge of gene expression and metabolic regulation guides strain development toward the biosynthesis of selected molecules.

Engineered strains then become experimental platforms for probing pathway constraints, regulatory responses, and previously inaccessible biological functions.

For society

Fermentation optimization and bioprocess scale-up determine whether biosynthesis can become reliable, efficient, and accessible beyond laboratory demonstrations.

Scalable microbial biomanufacturing can subsequently support new ingredients, materials, medicines, and production routes with industrial and economic relevance.

03 · Capacity gaps in food science

Capacity gaps in food science

These gaps concern the relationship between what instruments measure, what experiments reveal, and what predictive models retain across changing sources.

Development

The instrument–perception gap

Measurements should represent food properties in ways that agree with human sensory perception and remain useful for engineering decisions.

Optimization

Scaling out messy experiments

Food experiments involve variable materials and complex responses, requiring higher throughput without removing scientifically meaningful sources of variation.

Scaling

Extending the search space

Improved throughput expands the formulations and processing conditions that can be explored, creating opportunities for unexpected and transferable insights.

Optimization

Making predictive models generalize

Cross-source generalization determines whether predictive food models retain useful performance across ingredients, instruments, laboratories, and datasets.